課程資訊
課程名稱
R在生態資料分析之應用
Ecological Data Analysis in R 
開課學期
104-2 
授課對象
理學院  海洋生物及漁業組  
授課教師
單偉彌 
課號
Ocean5098 
課程識別碼
241EU5050 
班次
 
學分
全/半年
半年 
必/選修
選修 
上課時間
星期二2,3,4(9:10~12:10) 
上課地點
海研232 
備註
本課程以英語授課。
總人數上限:25人 
Ceiba 課程網頁
http://ceiba.ntu.edu.tw/1042Ocean5098_ 
課程簡介影片
 
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課程概述

This course is designed to teach the usage of R for the analysis of ecological data. It will introduce students to several different analysis options for biological or ecological data (focusing specifically on community-level data) using the free & open-source statistical, mapping, and graphing platform R. Broad topics covered will include: introduction to R language and basic functions / graphics; basic mapping options; diversity measurement; univariate, multivariate, parametric and non-parametric analysis and their basis; functional diversity; and ecological time series analysis. Students will require a laptop for sessions. Schedule is subject to changes according to student progress. 

課程目標
General knowledge in R language, and basic functions
Self-exploration of dataset, and customized analysis
In depth knowledge on community-ecology analysis
 
課程要求
Basic knowledge in ecology, biology and informatics 
預期每週課後學習時數
 
Office Hours
 
指定閱讀
 
參考書目
 
評量方式
(僅供參考)
   
課程進度
週次
日期
單元主題
Week 1
2/23  No class, read attached file 
Week 2
3/01  Introduction to R  
Week 3
3/08  Data manipulation 
Week 4
3/15  Data exploration - graph 
Week 5
3/22  Loop and basic models
Maps, GIS 
Week 6
3/29  Descriptive Statistics / GLM (1) 
Week 7
4/05  No class  
Week 8
4/12  GLM (2) 
Week 9
4/19  Mid-term week 
Week 10
4/26  Spatial correlation
Repeated measures 
Week 11
5/03  Mutivariate analysis (1) 
Week 12
5/10  Multivariate analysis (2) 
Week 13
5/17  No class 
Week 14
5/24  Multivariate analysis - unconstrained ordination (3) 
Week 15
5/31  Multivariate analysis - constrained ordination (4) 
Week 16
6/07  Ecological diversity 
Week 17
6/14  Functional diversity